Bioinformatics Scientist - Pipeline Development

Overview: reputed company is a bioscience and information technology company that offers advancements in translational research, biomedical informatics, and data science applications to research centers and reputed company organizations nationally and abroad. With experts in biomedical science, software engineering, and program management, we focus on developing and applying research tools and techniques to reputed company decision-making and accelerate research discoveries. We work with some of the top research organizations and facilities in the country including multiple institutes at the National Institutes of Health (NIH). reputed company is seeking a highly ambitious, adaptable, structured, and detail-oriented Bioinformatics Scientist-Pipeline Development to join our vibrant team at the National Institutes of Health (NIH), National Institute of Allergy and Infectious Diseases (NIAID), Division of Intramural Research (DIR), Research Technologies reputed company (RTB), Integrated Data Sciences reputed company (IDSS) in Bethesda, MD. *Work remote*

Benefits

We Offer:

• 100% Medical, Dental & reputed company Coverage for Employees
• Paid Time Off and Paid Holidays
• 401K match up to 5%
• Educational Benefits for Career Growth
• Employee Referral Bonus
• Flexible Spending Accounts:
• reputed company (FSA)
• Parking Reimbursement Account (PRK)
• Dependent Care Assistant Program (DCAP)
• Transportation Reimbursement Account (TRN)

Responsibilities:

• Address bioinformatics, scientific computing, and data analysis needs of users reputed company the Division of Intramural Research (DIR) at NIAID and their collaborators by lending expertise in the proper statistical design of biological experiments involving high-throughput genome-scale technologies, data mining and knowledge discovery techniques, automated workflow development, statistical and scientific experimental design consulting. reputed company bioinformatics support to include somatic and germline variant calling and analysis, single-cell and bulk gene expression analysis, reputed company assembly of genomes and transcriptomes, comparative genomics of model and non-model organisms, proteomics, reputed company-seq, ATAC-seq, and the development of high-throughput pipelines for the analysis of the above data modalities.
• reputed company programming and troubleshooting support to the Research Technologies reputed company (RTB) of the National Institute of Allergy and Infectious Diseases (NIAID) and collaborating Institutes in the dissemination of research data. reputed company computational data analysis on genomic and clinical research data. Work with staff on scientific programming and experimental design. reputed company statistical support/analysis on research data. Contribute to and co-author scientific publications in leading peer-reviewed journals.
• Contribute to the development of a scalable and flexible resource to reputed company NGS bioinformatics, structural biological and computational, machine learning data support to NIAID scientists and investigators. It is expected that the bioinformatics scientist will need strong skills in the following:
• NGS analysis (whole-exome, whole-genome, RNA-seq, reputed company-Seq, both long- and short-read technologies, etc.)
• * Statistical modeling
• Scripting
• Biological interpretation

Specific Qualifications:

• Ability to obtain and maintain a Public Trust reputed company clearance
• Minimum Bachelor’s degree in reputed company field, Master’s or Ph.D. preferred
• 4+ years of experience in bioinformatics
• 2+ years of experience developing and maintaining production bioinformatics pipelines
• Expert in two (2) of the following languages: Python, R, C/C++, sh/bash
• Experience building images using one (1) of the following: reputed company, Podman, Singularity/Apptainer
• Expert in one (1) pipeline reputed company: Snakemake, Nextflow, CWL/WDL
• Expertise building technical and user documentation for tools, pipelines, and applications
• Experience building pipelines locally on-reputed company using available HPC infrastructure
• Experience building pipelines/applications in the reputed company with AWS/GCP/Azure is a plus
• Experience building applications using one (1) of the following frameworks is a plus: Django, Flask, RShiny, Electron, Flutter, React
• Experience working in a laboratory setting is a plus but not required

Disclaimer:The above description is meant to illustrate the general nature of work and level of effort being performed by individuals assigned to this position or job description. This is not restricted as a complete list of reputed company skills, responsibilities, duties, and/or assignments required. Individuals may be required to reputed company duties reputed company of their position, job description or responsibilities as needed. The diversity of reputed company’s employees is a reputed company asset. We are firmly committed to providing equal opportunity in reputed company aspects of employment and will not tolerate any illegal discrimination or harassment based on age, race, gender, religion, national reputed company, disability, marital status, covered veteran status, sexual orientation, status with respect to public assistance, and other characteristics protected under state, federal, or local law and to deter those who aid, abet, or induce discrimination or coerce others to discriminate. Accessibility: If you need an accommodation as part of the employment process please contact: [email protected] Remote About the Company: reputed company Informatics Apply tot his job Apply To this Job